Cottage Cheese Protein Pasta Bake

Featured in: Quick Suppers

This hearty baked pasta combines whole wheat penne with a creamy cottage cheese and Greek yogurt blend, layered with seasoned lean ground beef and marinara. Topped with melted mozzarella and Parmesan, it bakes until golden and bubbling for ultimate comfort food satisfaction. With 35g protein per serving, it keeps you full while delivering rich, cheesy flavors the whole family will love.

Updated on Sat, 07 Feb 2026 14:21:00 GMT
Golden, bubbly mozzarella and Parmesan cheese melted over a hearty Cottage Cheese Protein Pasta Bake with Ground Beef, served fresh from the oven. Save to Pinterest
Golden, bubbly mozzarella and Parmesan cheese melted over a hearty Cottage Cheese Protein Pasta Bake with Ground Beef, served fresh from the oven. | metrochop.com

The first time I made this pasta bake, my husband actually asked what restaurant it came from. We were in the middle of a chaotic week, both working late, and I needed something that felt like a real meal but wouldn't take forever to throw together. The smell of bubbling cheese and savory beef filled our tiny apartment, and suddenly the stress of the day just melted away. Now it's become our go-to when we need comfort food that actually fuels us properly.

Last winter, my sister came over after a particularly rough breakup, and I made this without saying a word. She took one bite, looked up with tears in her eyes, and said 'this tastes like something Mom would have made.' We ended up sitting at the table for two hours just talking and picking at the pan until it was nearly gone. Sometimes the simplest dishes carry the most weight.

Ingredients

  • Whole wheat penne pasta: The nutty flavor stands up beautifully to the rich beef and creamy cheese layer, plus it adds fiber that keeps you satisfied longer
  • Cottage cheese: Don't knock it until you try it, this blends into the most velvety, protein-rich layer that nobody ever guesses is cottage cheese
  • Greek yogurt: Adds tang and creaminess while boosting the protein content even further
  • Shredded mozzarella cheese: Creates that irresistible golden, bubbly crust that makes everyone reach for seconds
  • Grated Parmesan cheese: Brings a salty, umami punch that cuts through the richness and ties everything together
  • Lean ground beef: Provides hearty flavor and substantial protein without excessive grease
  • Medium onion, diced: Sweetens as it cooks, adding subtle depth to the beef mixture
  • Minced garlic: Three cloves might feel bold, but it's essential for cutting through all that creamy cheese
  • Marinara sauce: Choose a good quality one you'd eat on its own since it provides the primary seasoning base
  • Italian seasoning: A simple blend that pulls all the classic Italian flavors together effortlessly
  • Salt and black pepper: Don't skimp here, the pasta and cheese need proper seasoning to shine
  • Fresh parsley, chopped: Adds a bright, fresh finish that cuts through the richness and makes the dish look beautiful

Instructions

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Preheat your oven and get the water going:
Set your oven to 375°F and fill a large pot with salted water, bringing it to a rolling boil while you gather your ingredients
Cook the pasta just right:
Boil the whole wheat penne for 1-2 minutes less than the package directs, since it will continue cooking in the oven
Brown the beef with aromatics:
In a large skillet over medium-high heat, cook the ground beef with diced onion and minced garlic until the beef reaches 165°F, then drain any excess fat
Season the meat mixture:
Stir in the Italian seasoning, salt, and pepper, letting the spices bloom for a minute before removing from heat
Create the creamy layer:
Whisk together the cottage cheese and Greek yogurt in a bowl until completely smooth and no lumps remain
Layer it all up:
Spread the cooked pasta in your baking dish, top with the seasoned beef mixture, pour the marinara over everything, and give it a gentle toss
Add the cheese blanket:
Spoon the cottage cheese mixture evenly across the top, then cover completely with mozzarella and Parmesan
Bake until golden:
Slide it into the oven for 20-25 minutes until the cheese is bubbling and turning golden brown around the edges
Let it rest and serve:
Give the dish 5-10 minutes to set before slicing, then sprinkle with fresh parsley and watch everyone dig in
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Air fry, roast, reheat, and dehydrate meals quickly for crispy snacks and easy weeknight dinners.
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A close-up shot shows creamy cottage cheese blend and marinara sauce coating whole wheat penne and savory ground beef in a baking dish. Save to Pinterest
A close-up shot shows creamy cottage cheese blend and marinara sauce coating whole wheat penne and savory ground beef in a baking dish. | metrochop.com

I brought this to a neighborhood potluck last month, and three different people asked for the recipe before they even finished their first serving. Watching them hover around the pan, sneaking just one more spoonful, reminded me why I started cooking in the first place. Food like this brings people together in the most genuine way.

Make It Your Own

After making this countless times, I've found that stirring chopped spinach or roasted vegetables into the beef mixture adds incredible flavor and nutrition. Ground turkey or chicken work beautifully if you're looking to lighten it up, and sometimes I throw in red pepper flakes for a subtle kick that wakes everything up. The recipe is forgiving enough that you can play around while still ending up with something delicious.

Storage Wisdom

This actually improves overnight as the flavors meld together, so don't stress about making it ahead. I often assemble everything the night before and just pop it in the oven when I get home from work. Leftovers keep perfectly in the refrigerator for three days, and they reheat so well you might actually prefer them. The pasta absorbs some of the sauce and becomes even more flavorful.

Serving Ideas

A crisp green salad with vinaigrette cuts through the richness beautifully, and garlic bread is pretty much mandatory in our house. Sometimes I serve it with roasted broccoli or steamed green beans for a complete meal that feels substantial but not heavy.

  • Let the dish rest for those full 10 minutes, even if everyone is begging to eat
  • Grate your own Parmesan if you can, it makes a huge difference in the final flavor
  • Set out extra red pepper flakes at the table so people can adjust the heat themselves
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Fresh parsley garnishes this bubbling Cottage Cheese Protein Pasta Bake with Ground Beef, featuring a golden cheese crust and hearty pasta layers. Save to Pinterest
Fresh parsley garnishes this bubbling Cottage Cheese Protein Pasta Bake with Ground Beef, featuring a golden cheese crust and hearty pasta layers. | metrochop.com

There's something deeply satisfying about serving a dish that looks impressive but secretly came together in under an hour. This pasta bake has become my secret weapon for feeding a crowd without spending my whole day in the kitchen.

Recipe FAQ

Can I make this pasta bake ahead of time?

Yes, assemble the entire dish up to 24 hours in advance and refrigerate. Bake when ready, adding 5-10 minutes to the cooking time if baking cold.

What pasta works best for this dish?

Whole wheat penne is ideal because its ridges hold the sauce well, but regular penne, rotini, or ziti work perfectly if you prefer traditional pasta.

Can I freeze leftovers?

Absolutely. Portion leftovers into airtight containers and freeze for up to 3 months. Thaw overnight in the refrigerator before reheating.

How do I know when it's done baking?

The dish is ready when the cheese is golden brown and bubbling around the edges, typically 20-25 minutes at 375°F.

Can I use ground turkey instead of beef?

Yes, ground turkey or chicken make excellent lean substitutes. Just adjust seasonings slightly as poultry has a milder flavor than beef.

Cottage Cheese Protein Pasta Bake

Creamy whole wheat penne with cottage cheese, ground beef, and melted mozzarella for a protein-rich comfort meal.

Prep Time
15 minutes
Bake/Cook Time
25 minutes
Time Needed
40 minutes
Recipe By Elizabeth Perry


Skill Level Easy

Cuisine American

Makes 8 Portions

Dietary Needs None specified

What You'll Need

Pasta & Cheese

01 12 oz whole wheat penne pasta
02 2 cups cottage cheese, full-fat preferred
03 1 cup plain Greek yogurt
04 2 cups shredded mozzarella cheese
05 1 cup grated Parmesan cheese

Meat & Vegetables

01 1 lb lean ground beef (93% lean or higher)
02 1 medium onion, diced
03 3 cloves garlic, minced

Sauces & Seasonings

01 2 cups marinara sauce
02 1 tsp Italian seasoning
03 1 tsp salt
04 1/2 tsp black pepper

Garnish

01 2 tbsp fresh parsley, chopped

How-To Steps

Step 01

Preheat Oven: Preheat oven to 375°F.

Step 02

Cook Pasta: Bring a large pot of salted water to a boil. Cook whole wheat penne until al dente, about 1-2 minutes less than package instructions. Drain thoroughly, reserving 1/2 cup pasta water if needed for later.

Step 03

Brown Ground Beef: While pasta cooks, heat a large skillet over medium-high heat. Add ground beef, diced onion, and minced garlic. Cook until beef is browned and reaches an internal temperature of 165°F, about 8-10 minutes. Drain excess grease. Stir in Italian seasoning, salt, and black pepper. Remove from heat.

Step 04

Prepare Cheese Mixture: In a mixing bowl, blend cottage cheese and Greek yogurt until smooth and creamy.

Step 05

Assemble Pasta Bake: In a large baking dish, layer the cooked pasta first. Evenly distribute the beef mixture over the pasta, then pour the marinara sauce on top. Gently mix to combine.

Step 06

Add Cheese Layer: Spoon the cottage cheese mixture over the pasta and spread evenly with a spatula. Top with shredded mozzarella and grated Parmesan, covering the surface completely.

Step 07

Bake: Bake for 20-25 minutes, until the cheese is golden and bubbling around the edges.

Step 08

Rest and Serve: Remove from oven and let rest for 5-10 minutes before slicing. Garnish with fresh parsley and serve.

Tools You'll Need

  • Large pot
  • Large skillet
  • Large baking dish (9x13 inch recommended)
  • Mixing bowls
  • Spatula
  • Instant-read thermometer (optional)

Allergy Notes

Always check each ingredient for allergens and reach out to a healthcare provider if you're uncertain.
  • Contains wheat (gluten)
  • Contains milk (dairy)
  • Check all labels for cross-contamination if allergies are a concern

Nutrition Details (per portion)

These details are for informational purposes and aren't a substitute for professional medical guidance.
  • Energy: 400
  • Fats: 15 g
  • Carbohydrates: 35 g
  • Proteins: 35 g